Institut Català de la Salut
[Kui B] Department of Medicine, University of Szeged, Szeged, Hungary. Centre for Translational Medicine, Department of Medicine, University of Szeged, Szeged, Hungary. [Pintér J, Nagy M] Department of Stochastics, Institute of Mathematics, Budapest University of Technology and Economics, Budapest, Hungary. [Molontay R] Department of Stochastics, Institute of Mathematics, Budapest University of Technology and Economics, Budapest, Hungary. MTA-BME Stochastics Research Group, Budapest, Hungary. [Farkas N] Institute for Translational Medicine, Szentágothai Research Centre, Medical School, University of Pécs, Pécs, Hungary. Institute of Bioanalysis, Medical School, University of Pécs, Pécs, Hungary. [Gede N] Institute for Translational Medicine, Szentágothai Research Centre, Medical School, University of Pécs, Pécs, Hungary. [Pando E, Alberti P, Gómez-Jurado MJ] Servei de Cirurgia Hepatobiliopancreàtica i Trasplantaments, Vall d’Hebron Hospital Universitari, Barcelona, Spain. Universitat Autònoma de Barcelona, Bellaterra, Spain
Vall d'Hebron Barcelona Hospital Campus
2022-09-09T08:31:53Z
2022-09-09T08:31:53Z
2022-06
Acute pancreatitis; Artificial intelligence; Severity prediction
Pancreatitis aguda; Inteligencia artificial; Predicción de gravedad
Pancreatitis aguda; Intel·ligència artificial; Predicció de la gravetat
Background Acute pancreatitis (AP) is a potentially severe or even fatal inflammation of the pancreas. Early identification of patients at high risk for developing a severe course of the disease is crucial for preventing organ failure and death. Most of the former predictive scores require many parameters or at least 24 h to predict the severity; therefore, the early therapeutic window is often missed. Methods The early achievable severity index (EASY) is a multicentre, multinational, prospective and observational study (ISRCTN10525246). The predictions were made using machine learning models. We used the scikit-learn, xgboost and catboost Python packages for modelling. We evaluated our models using fourfold cross-validation, and the receiver operating characteristic (ROC) curve, the area under the ROC curve (AUC), and accuracy metrics were calculated on the union of the test sets of the cross-validation. The most critical factors and their contribution to the prediction were identified using a modern tool of explainable artificial intelligence called SHapley Additive exPlanations (SHAP). Results The prediction model was based on an international cohort of 1184 patients and a validation cohort of 3543 patients. The best performing model was an XGBoost classifier with an average AUC score of 0.81 ± 0.033 and an accuracy of 89.1%, and the model improved with experience. The six most influential features were the respiratory rate, body temperature, abdominal muscular reflex, gender, age and glucose level. Using the XGBoost machine learning algorithm for prediction, the SHAP values for the explanation and the bootstrapping method to estimate confidence, we developed a free and easy-to-use web application in the Streamlit Python-based framework (http://easy-app.org/). Conclusions The EASY prediction score is a practical tool for identifying patients at high risk for severe AP within hours of hospital admission. The web application is available for clinicians and contributes to the improvement of the model.
University of Pécs Medical School Research Fund. Grant Number: 300909. National Research, Development and Innovation Office Research Fund. Grant Numbers: K131996, FK131864, K128222, FK124632
Article
Published version
English
Pancreatitis - Diagnòstic; Intel·ligència artificial - Aplicacions a la medicina; DISEASES::Digestive System Diseases::Pancreatic Diseases::Pancreatitis; Other subheadings::Other subheadings::/diagnosis; INFORMATION SCIENCE::Information Science::Computing Methodologies::Algorithms::Artificial Intelligence; ENFERMEDADES::enfermedades del sistema digestivo::enfermedades pancreáticas::pancreatitis; Otros calificadores::Otros calificadores::/diagnóstico; CIENCIA DE LA INFORMACIÓN::Ciencias de la información::metodologías computacionales::algoritmos::inteligencia artificial
Wiley
Clinical and Translational Medicine;12(6)
https://doi.org/10.1002/ctm2.842
Attribution 4.0 International
http://creativecommons.org/licenses/by/4.0/
Articles científics - HVH [3436]