BioTIME : a database of biodiversity time series for the Anthropocene

Author

Dornelas, Maria

Antao, Laura Henriques

Moyes, Faye

Bates, Amanda E.

Magurran, Anne

Adam, Dušan

Akhmetzhanova, Asem A.

Appeltans, Ward

Arcos, José Manuel

Arnold, Haley

Ayyappan, Narayanan

Badihi, Gal

Baird, Andrew H.

Barbosa, Miguel

Barreto, Tiago Egydio

Bässler, Claus

Bellgrove, Alecia

Belmaker, Jonathan

Benedetti-Cecchi, Lisandro

Bett, Brian J.

Bjorkman, Anne

Błażewicz, Magdalena

Blowes, Shane A.

Bloch, Christopher P.

Bonebrake, Timothy C.

Boyd, Susan

Bradford, Matt

Brooks, Andrew J.

Brown, James H.

Bruelheide, Helge

Budy, Phaedra

Carvalho, Fernando

Castaneda, Edward

Chen, Chaolun Allen

Chamblee, John F.

Chase, Tory J.

Siegwart Collier, Laura

Collinge, Sharon K.

Condit, Richard

Cooper, Elisabeth J.

Cornelissen, J. H. C

Cotano, Unai

Kyle Crow, Shannan

Damasceno, Gabriella

Davies, Claire H.

Davis, Robert A.

Day, Frank P.

Degraer, Steven

Doherty, Tim S.

Dunn, Timithy E.

Durigan, Giselda

Duffy, J. Emmett

Edelist, Dor

Edgar, Graham J.

Elahi, Robin

Elmendorf, Sarah C.

Enemar, Anders

Ernest, S. K. Morgan

Escribano, Rubén

Estiarte, Marc

Evans, Brian S.

Fan, Tung- Yung

Turini Farah, Fabiano

Loureiro Fernandes, Luiz

Farneda, Fábio Z.

Fidelis, Alessandra

Fitt, Robert

Fosaa, Anna Maria

Daher Correa Franco, Geraldo Antonio

Frank, Grace E.

Fraser, William R.

García, Hernando

Cazzolla Gatti, Roberto

Givan, Or

Gorgone-Barbosa, Elizabeth

Gould, William A.

Gries, Corinna

Grossman, Gary D.

Gutiérrez Camus, Julio Roberto

Hale, Stephen

Harmon, Mark E.

Harte, John

Haskins, Gary

Henshaw, Donald L.

Hermanutz, Luise

Hidalgo, Pamela

Higuchi, Pedro

Hoey, Andrew

Van Hoey, Gert

Hofgaard, Annika

Holeck, Kristen

Hollister, R. D

Holmes, Richard

Hoogenboom, Mia

Hsieh, Chih-Hao

Hubbell, Stephen P

Huettmann, Falk

Huffard, Christine L.

Hurlbert, Allen H.

Macedo Ivanauskas, Natália

Janík, David

Jandt, Ute

Jażdżewska, Anna

Johannessen, Tore

Johnstone, J. F

Jones, Julia

Jones, Faith A. M.

Kang, Jungwon

Kartawijaya, Tasrif

Keeley, Erin C.

Kelt, Douglas A.

Kinnear, Rebecca

Klanderud, Kari

Knutsen, Halvor

Koenig, Christopher C.

Kortz, Alessanddra R.

Král, Kamil

Kuhnz, Linda A.

Kuo, Chao-Yang

Kushner, David J.

Laguionie-Marchais, Claire

Lancaster, Lesley T.

Min Lee, Cheol

Lefcheck, Jonathan S.

Lévesque, Esther

Lightfoot, David

Lloret Maya, Francisco

Lloyd, John D.

López-Baucells, Adrià

Louzao, Maite

Madin, Joshua S.

Magnússon, Borgthór

Malamud, Shahar

Matthews, Iain

McFarland, Kent P.

McGill, Brian

McKnight, Diane

McLarney, William O.

Meador, Jason

Meserve, Peter L.

Metcalfe, Daniel J.

Meyer, Christoph F. J.

Michelsen, Anders

Milchakova, Nataliya

Moens, Tom

Moland, Even

Moore, Jon

Mathias Moreira, Carolina

Müller, Jörg

Murphy, Grace

Myers-Smith, I. H

Myster, Randall W.

Naumov, Andrew

Neat, Francis

Nelson, James A.

Paul Nelson, Michael

Newton, Stephen F.

Norden, Natalia

Oliver, Jeffrey C.

Olsen, Esben M.

Onipchenko, Vladimir

Pabis, Krzysztof

Pabst, Robert J.

Paquette, Alain

Pardede, Sinta

Paterson, David M.

Pélissier, Raphaël

Peñuelas, Josep

Pérez-Matus, Alejandro

Pizarro, Oscar

Pomati, Francesco

Post, Eric

Prins, Herbert H. T.

Priscu, John C.

Provoost, Pieter

Prudic, Kathleen L.

Pulliainen, Erkki

Ramesh, B. R.

Mendivil Ramos, Olivia

Rassweiler, Andrew

Rebelo, Jose Eduardo

Reed, Daniel C.

Reich, Peter

Remillard, Suzanne M.

Richardson, Anthony J.

Richardson, J. Paul

van Rijn, Itai

Rocha, Ricardo

Rivera-Monroy, Victor H.

Rixen, Christian

Robinson, Kevin P.

Ribeiro Rodrigues, Ricardo

de Cerqueira Rossa-Feres, Denise

Rudstam, Lars

Ruhl, Henry

Ruz, Catalina S.

Sampaio, Erica M.

Rybicki, Nancy

Rypel, Andrew

Sal, Sofia

Salgado, Beatriz

Santos, Flavio A. M.

Savassi-Coutinho, Ana Paula

Scanga, Sara

Schmidt, Jochen

Schooley, Robert

Setiawan, Fakhrizal

Shao, Kwang-Tsao

Shaver, Gaius R.

Sherman, Sally

Sherry, Thomas W.

Siciński, Jacek

Sievers, Caya

da Silva, Ana Carolina

Rodrigues da Silva, Fernando

Silveira, Fabio L.

Slingsby, Jasper

Smart, Tracey

Snell, Sara J.

Soudzilovskaia, Nadejda A.

Souza, Gabriel B. G.

Maluf Souza, Flaviana

Castro Souza, Vinícius

Stallings, Christopher D.

Stanforth, Rowan

Stanley, Emily H.

Mauro Sterza, Jose

Stevens, Maarten

Stuart-Smith, Rick

Rondon Suarez, Yzel

Supp, Sarah

Yoshio Tamashiro, Jorge

Tarigan, Sukmaraharja

Thiede, Gary P.

Thorn, Simon

Tolvanen, Anne

Teresa Zugliani Toniato, Maria

Totland, Ørjan

Twilley, Robert R.

Vaitkus, Gediminas

Valdivia, Nelson

Vallejo, Martha Isabel

Valone, Thomas J.

Van Colen, Carl

Vanaverbeke, Jan

Venturoli, Fabio

Verheye, Hans M.

Vianna, Marcelo

Vieira, Rui P.

Vrška, Tomás

Quang Vu, Con

Van Vu, Lien

Waide, Robert B.

Waldock, Conor

Watts, Dave

Webb, Sara

Wesołowski, Tomasz

White, Ethan P.

Widdicombe, Claire E.

Wilgers, Dustin

Williams, Richard

Williams, Stefan B.

Williamson, Mark

Willig, Michael R.

Willis, Trevor J..

Wipf, Sonja

Woods, Kerry D.

Woehler, Eric J.

Zawada, Kyle

Zettler, Michael L.

Publication date

2018

Abstract

Motivation: The BioTIME database contains raw data on species identities and abundances in ecological assemblages through time. These data enable users to calculate temporal trends in biodiversity within and amongst assemblages using a broad range of metrics. BioTIME is being developed as a community-led open-source database of biodiversity time series. Our goal is to accelerate and facilitate quantitative analysis of temporal patterns of biodiversity in the Anthropocene. Main types of variables included: The database contains 8,777,413 species abundance records, from assemblages consistently sampled for a minimum of 2 years, which need not necessarily be consecutive. In addition, the database contains metadata relating to sampling methodology and contextual information about each record. Spatial location and grain: BioTIME is a global database of 547,161 unique sampling locations spanning the marine, freshwater and terrestrial realms. Grain size varies across datasets from 0.0000000158 km (158 cm) to 100 km (1,000,000,000,000 cm). Time period and grain: BioTIME records span from 1874 to 2016. The minimal temporal grain across all datasets in BioTIME is a year. Major taxa and level of measurement: BioTIME includes data from 44,440 species across the plant and animal kingdoms, ranging from plants, plankton and terrestrial invertebrates to small and large vertebrates. Software format:.csv and.SQL.

Document Type

Article

Language

English

Publisher

 

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Rights

open access

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