Chimpanzee genomic diversity reveals ancient admixture with bonobos

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dc.contributor.author	de Manuel, Marc
dc.contributor.author	Kuhlwilm, Martin
dc.contributor.author	Sousa, Victor C.
dc.contributor.author	Prado Martínez, Javier, 1987-
dc.contributor.author	Hernández Rodríguez, Jéssica, 1983-
dc.contributor.author	Dupanloup, Isabelle
dc.contributor.author	Lao Grueso, Oscar, 1976-
dc.contributor.author	Heredia Genestar, José María
dc.contributor.author	Kuderna, Lukas F.K.
dc.contributor.author	Casals López, Ferran
dc.contributor.author	Angedakin, Samuel
dc.contributor.author	Arandjelovic, Mimi
dc.contributor.author	Boesch, Christophe
dc.contributor.author	Kühl, Hjalmar
dc.contributor.author	Vigilant, Linda
dc.contributor.author	Navarro i Cuartiellas, Arcadi, 1969-
dc.contributor.author	Excoffier, Laurent
dc.contributor.author	Marquès i Bonet, Tomàs, 1975-
dc.date	2016
dc.identifier.citation	de Manuel M, Kuhlwilm M, Frandsen P, Sousa VC, Desai T, Prado-Martinez J et al. Chimpanzee genomic diversity reveals ancient admixture with bonobos. Science. 2016 Oct 28; 354(6311): 477-48. DOI: 10.1126/science.aag2602
dc.identifier.citation	0036-8075
dc.identifier.citation	http://dx.doi.org/10.1126/science.aag2602
dc.identifier.uri	http://hdl.handle.net/10230/35987
dc.format	application/pdf
dc.language.iso	eng
dc.publisher	American Association for the Advancement of Science (AAAS)
dc.relation	info:eu-repo/grantAgreement/ES/1PE/BFU2015-68759-P
dc.relation	info:eu-repo/grantAgreement/ES/1PE/BFU2015-68649-P
dc.relation	info:eu-repo/grantAgreement/ES/1PE/BFU2014-55090-P
dc.rights	This is the author’s version of the work. It is posted here by permission of the AAAS for personal use, not for redistribution. The definitive version was published in Science on Volume 354, number 6311, 2016. DOI: 10.1126/science.aag2602
dc.rights	info:eu-repo/semantics/openAccess
dc.subject	Evolució molecular
dc.subject	Genètica
dc.subject	Bonobo -- Genètica
dc.subject	Ximpanzés -- Genètica
dc.title	Chimpanzee genomic diversity reveals ancient admixture with bonobos
dc.type	info:eu-repo/semantics/article
dc.type	info:eu-repo/semantics/acceptedVersion
dc.description.abstract	Our closest living relatives, chimpanzees and bonobos, have a complex demographic history. We analyzed the high-coverage whole genomes of 75 wild-born chimpanzees and bonobos from 10 countries in Africa. We found that chimpanzee population substructure makes genetic information a good predictor of geographic origin at country and regional scales. Multiple lines of evidence suggest that gene flow occurred from bonobos into the ancestors of central and eastern chimpanzees between 200,000 and 550,000 years ago, probably with subsequent spread into Nigeria-Cameroon chimpanzees. Together with another, possibly more recent contact (after 200,000 years ago), bonobos contributed less than 1% to the central chimpanzee genomes. Admixture thus appears to have been widespread during hominid evolution.
dc.description.abstract	All sequence data have been submitted to the European Nucleotide Archive and are available under accession code PRJEB15086. M.d.M. is supported by a Formació de personal Investigador fellowship from Generalitat de Catalunya (FI_B01111). M.K. is supported by a Deutsche Forschungsgemeinschaft fellowship (KU 3467/1-1). V.C.S., I.D., and L.E. are supported by Swiss National Science Foundation grants 31003A-143393 and 310030B-16660. O.L. is supported by a Ramón y Cajal grant from Ministerio de Economía y Competitividad (MINECO) (RYC-2013-14797) and MINECO grant BFU2015-68759-P [Fondo Europeo de Desarrollo Region (FEDER)]. P.H. is supported by Estonian Research Council grant PUT1036. J.P.-M., C.T.-S., and Y.X. were supported by The Wellcome Trust (098051). J.M.H.-G. is supported by the María de Maeztu Programme (MDM-2014-0370). A.S. is supported by an Isaac Newton Trust/Wellcome Trust Institutional Strategic Support Fund Joint Research Grant. J.N. had support from a U.S. NIH U01CA198933 grant, and B.M.P. is supported by a Swiss National Science Foundation postdoctoral fellowship. A.N. is supported by MINECO grant BFU2015-68649-P. T.M.-B. thanks ICREA; the European Molecular Biology Organization Young Investigator Programme 2013; MINECO grants BFU2014-55090-P (FEDER), BFU2015-7116-ERC, and BFU2015-6215-ERCU01; U.S. NIH grant MH106874

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