5S ribosomal RNA is an essential component of a nascent ribosomal precursor complex that regulates the Hdm2-p53 checkpoint 

    Donati, Giulio; Peddigari, Suresh; Mercer, Carol A.; Thomas, George (2018-11-27)

    Recently, we demonstrated that RPL5 and RPL11 act in a mutually dependent manner to inhibit Hdm2 and stabilize p53 following impaired ribosome biogenesis. Given that RPL5 and RPL11 form a preribosomal complex with noncoding ...

    6-phosphofructo-2-kinase (pfkfb3) gene promoter contains hypoxia-inducible factor-1 binding sites necessary for transactivation in response to hypoxia 

    Obach Cortadellas, Mercè; Navarro i Sabaté, Àurea; Caro, Jaime; Kong, Xianguo; Duran i Ferrer, Joan, 1978-; Gomez Grau, Marta; Perales Losa, Carlos; Ventura Pujol, Francesc; Rosa López, José Luis; Bartrons Bach, Ramon (2021-11-17)

    The up-regulation of glycolysis to enhance the production of energy under reduced pO(2) is a hallmark of the hypoxic response. A key regulator of glycolytic flux is fructose-2,6-bisphosphate, and its steady state concentration ...

    A correction procedure for the asymmetry of differential pressure transducers in respiratory impedance measurements 

    Farré Ventura, Ramon; Navajas Navarro, Daniel; Peslin, René; Rotger i Estapé, Maria del Mar; Duvivier, Claude (2009-06-17)

    The usual setup for measuring respiratory input impedance requires a differential pressure transducer attached to a pneumotachograph. Because no data correction procedure has been devised to account for transducer asymmetry, ...

    A DERL3-associated defect in the degradation of SLC2A1 mediates the Warburg effect 

    López Serra, Paula; Marcilla, Miguel; Villanueva Garatachea, Alberto; Ramos Fernandez, Antonio; Palau, Anna; Leal, Lucía; Wahi, Jessica E.; Setién, Fernando; Szczesna, Karolina; Moutinho, Cátia; Martínez Cardús, Anna; Heyn, Holger; Sandoval, Juan; Puertas, Sara; Vidal-Bel, August; Sanjuan, Xavier; Martínez Balibrea, Eva; Viñals Canals, Francesc; Perales Losa, Carlos; Bramsem, Jesper B.; Ørntoft, Torben F.; Andersen, Claus L.; Tabernero Caturla, Josep; McDermott, Ultan; Boxer, Matthew B.; Vander Heiden, Matthew G.; Albar, Juan Pablo; Esteller, Manel (2018-11-08)

    Cancer cells possess aberrant proteomes that can arise by the disruption of genes involved in physiological protein degradation. Here we demonstrate the presence of promoter CpG island hypermethylation-linked inactivation ...

    A DNA methylation-based definition of biologically distinct breast cancer subtypes 

    Stefansson, Olafur A.; Moran, Sebastian; Gómez, Antonio; Sayols, Sergi; Arribas, Carles; Sandoval, Juan; Hilmarsdottir, Holmfridur; Olafsdottir, Elinborg; Tryggvadottir, Laufey; Jonasson, Jon G.; Eyfjord, Jorunn E.; Esteller, Manel (2021-06-08)

    In cancer, epigenetic states are deregulated and thought to be of significance in cancer development and progression. We explored DNA methylation-based signatures in association with breast cancer subtypes to assess their ...

    A landscape of pharmacogenomic interactions in cancer 

    Iorio, Francesco; Knijnenburg, Theo A.; Vis, Daniel J.; Bignell, Graham; Menden, Michael P.; Schubert, Michael; Aben, Nanne; Gonçalves, Emanuel; Barthorpe, Syd; Lightfoot, Howard; Cokelae, Thomas; Greninger, Patricia; Dyk, Ewald van; Chang, Han; Silva, Heshani de; Heyn, Holger; Deng, Xianming; Egan, Regina K.; Liu, Qingsong; Mironenko, Tatiana; Mitropoulos, Xeni; Richardson, Laura; Wang, Jinhua; Zhang, Tinghu; Moran, Sebastian; Sayols, Sergi; Soleimani, Maryam; Tamborero Noguera, David; López Bigas, Núria; Ross-Macdonald, Petra; Esteller, Manel; Gray, Nathanael S.; Haber, Daniel A.; Stratton, Michael R.; Benes, Cyril H.; Wessels, Lodewyk F. A.; Saez-Rodriguez, Julia; McDermott, Ultan; Garnett, Mathew J. (2017-07-28)

    Systematic studies of cancer genomes have provided unprecedented insights into the molecular nature of cancer. Using this information to guide the development and application of therapies in the clinic is challenging. Here, ...

    A liaison between mTOR signaling, ribosome biogenesis and cancer 

    Gentilella, Antonio; Kozma, Sara C.; Thomas, George (2018-11-08)

    The ability to translate genetic information into functional proteins is considered a landmark in evolution. Ribosomes have evolved to take on this responsibility and, although there are some differences in their molecular ...

    A microRNA DNA methylation signature for human cancer metastasis 

    Lujambio, Amaia; Calin, George A.; Villanueva Garatachea, Alberto; Ropero, Santiago; Sánchez Céspedes, Montserrat; Blanco, David; Montuenga, Luis M.; Rossi, Simona; Nicoloso, Milena S.; Faller, William J.; Gallagher, William M.; Eccles, Suzanne A.; Croce, Carlo M.; Esteller, Manel (2021-07-23)

    MicroRNAs (miRNAs) are small, noncoding RNAs that can contribute to cancer development and progression by acting as oncogenes or tumor suppressor genes. Recent studies have also linked different sets of miRNAs to metastasis ...

    A multiplatform approach identifies miR-152-3p as a common epigenetically regulated onco-suppressor in prostate cancer targeting TMEM97 

    Ramalho-Carvalho, João; Gonçalves, Céline S; Graça, Inês; Bidarra, David; Pereira-Silva, Eva; Salta, Sofia; Godinho, Maria Inês; Gómez, Antonio; Esteller, Manel; Costa, Bruno M.; Henrique, Rui; Jerónimo, Carmen (2018-07-27)

    Background: Prostate cancer (PCa) is a major cause of morbidity and mortality in men worldwide. MicroRNAs are globally downregulated in PCa, especially in poorly differentiated tumors. Nonetheless, the underlying mechanisms ...

    A mutation in the POT1 gene is responsible for cardiac angiosarcoma in TP53-negative Li-Fraumeni-like families 

    Calvete, Oriol; Martinez, Paula; Garcia Pavia, Pablo; Benitez Buelga, Carlos; Paumard Hernández, Beatriz; Fernandez, Victoria; Dominguez, Fernando; Salas, Clara; Romero Laorden, Nuria; Garcia Donas, Jesus; Carrillo, Jaime; Perona, Rosario; Triviño, Juan Carlos; Andrés, Raquel; Cano, Juana María; Rivera, Barbara; Alonso Pulpon, Luis; Setién, Fernando; Esteller, Manel; Rodriguez Perales, Sandra; Bougeard, Gaelle; Frebourg, Tierry; Urioste, Miguel; Blasco, María A.; Benitez, Javier (2019-01-21)

    Cardiac angiosarcoma (CAS) is a rare malignant tumour whose genetic basis is unknown. Here we show, by whole-exome sequencing of a TP53-negative Li-Fraumeni-like (LFL) family including CAS cases, that a missense variant ...

    A new approach to epigenome-wide discovery of non-invasive methylation biomarkers for colorectal cancer screening in circulating cell-free DNA using pooled samples 

    Gallardo Gómez, María; Moran, Sebastian; Páez de la Cadena, María; Martínez Zorzano, Vicenta Soledad; Rodríguez Berrocal, Francisco Javier; Rodríguez Girondo, Mar; Esteller, Manel; Cubiella, Joaquín; Bujanda, Luis; Castells Garangou, Antoni; Balaguer Prunés, Francesc; Jover, Rodrigo; De Chiara, Loretta (2019-05-03)

    BACKGROUND: Colorectal cancer is the fourth cause of cancer-related deaths worldwide, though detection at early stages associates with good prognosis. Thus, there is a clear demand for novel non-invasive tests for the early ...

    A new class of fatty acid allene oxide formed by the DOX-P450 fusion proteins of human and plant pathogenic fungi, C. immitis and Z. tritic 

    Oliw, Ernst H.; Aragó Belenguer, Marc; Chen, Yang; Jernerén, Fredrik (2018-10-09)

    Linoleate dioxygenase-cytochrome P450 (DOX-CYP) fusion enzymes are common in pathogenic fungi. The DOX domains form hydroperoxy metabolites of 18:2n-6, which can be transformed by the CYP domains to 1,2- or 1,4-diols, epoxy ...

    A new estimator to minimize the error due to breathing in the measurement of respiratory impedance 

    Navajas Navarro, Daniel; Farré Ventura, Ramon; Rotger i Estapé, Maria del Mar; Peslin, René (2009-06-17)

    This paper presents a new respiratory impedance estimator to minimize the error due to breathing. Its practical reliability was evaluated in a simulation using realistic signals. These signals were generated by superposing ...

    A novel and efficient tandem CD19- and CD22-directed CAR for B cell ALL 

    Romecín, Paola Alejandra; Zanetti, Samanta Romina; Velasco-Hernandez, Talia; Gutierrez-Agüera, Francisco; Díaz, Víctor M.; Roca-Ho, Heleia; Sánchez-Martínez, Diego; Tirado Cabrera, Néstor; Baroni, Matteo Libero; Petazzi, Paolo; Torres-Ruiz, Raúl; Molina, Òscar; Bataller Torralba, Alex; Fuster, José Luis; Ballerini, Paola; Juan, Manel; Jeremias, Irmela; Bueno, Clara; Menéndez, Pablo (2025-02-04)

    CD19-directed chimeric antigen receptor (CAR) T cells have yielded impressive response rates in refractory/relapse B cell acute lymphoblastic leukemia (B-ALL); however, most patients ultimately relapse due to poor CAR T ...

    A novel epigenetic signature for early diagnosis in lung cancer 

    Diaz-Lagares, Angel; Méndez González, Jesús; Hervas, David; Saigí, Maria; Pajares, María José; Garcia, Diana; Crujeiras, Ana B.; Pio, Ruben; Montuenga, Luis M.; Zulueta, Javier J.; Nadal, Ernest; Rosell, Antoni, 1963-; Esteller, Manel; Sandoval, Juan (2017-07-10)

    Purpose: lung cancer remains as the leading cause of cancer-related death worldwide, mainly due to late diagnosis. Cytology is the gold-standard method for lung cancer diagnosis in minimally invasive respiratory samples, ...

    A novel prohibitin-binding compound induces the mitochondrial apoptotic pathway through NOXA and BIM upregulation 

    Moncunill Massaguer, Cristina; Saura-Esteller, José; Pérez-Perarnau, Alba; Palmeri, Claudia Mariela; Núñez-Vázquez, Sonia; Cosialls Castel, Ana Mª; González Gironés, Diana M.; Pomares, Helena; Korwitz, Anne; Preciado Gallego, Sara; Albericio Palomera, Fernando; Lavilla Grífols, Rodolfo; Pons i Irazazábal, Gabriel; Langer, Thomas; Iglesias i Serret, Daniel; Gil i Santano, Joan (2016-03-30)

    We previously described diaryl trifluorothiazoline compound 1a (hereafter referred to as fluorizoline) as a first-in-class small molecule that induces p53-independent apoptosis in a wide range of tumor cell lines. Fluorizoline ...

    A novel role of sphingosine 1-phosphate receptor S1pr1 in mouse thrombopoiesis 

    Zhang, Lin; Orban, Martin; Lorenz, Michael; Barocke, Verena; Braun, Daniel; Urtz, Nicole; Schulz, Christian; Von Brühl, Marie-Luise; Tirniceriu, Anca; Gaertner, Florian; Proia, Richard L.; Graf, Thomas; Bolz, Steffen-Sebastian; Montañez, Eloi; Prinz, Marco; Müller, Alexandra; Von Baumgarten, Louisa; Billich, Andreas; Sixt, Michael; Fässler, Reinhard; Von Andrian, Ulrich H.; Junt, Tobias; Massberg, Steffen (2020-05-22)

    Millions of platelets are produced each hour by bone marrow (BM) megakaryocytes (MKs). MKs extend transendothelial proplatelet (PP) extensions into BM sinusoids and shed new platelets into the blood. The mechanisms that ...

    A novel type of cellular senescence that can be enhanced in mouse models and human tumor xenografts to suppress prostate tumorigenesis 

    Alimonti, Andrea; Nardella, Caterina; Chen, Zhenbang; Clohessy, John G.; Carracedo, Arkaitz; Trotman, Lloyd C.; Cheng, Ke; Varmeh, Shohreh; Kozma, Sara C.; Thomas, George; Rosivatz, Erika; Woscholski, Rudiger; Cognetti, Francesco; Scher, Howard I.; Pandolfi, Pier Paolo (2021-05-11)

    Irreversible cell growth arrest, a process termed cellular senescence, is emerging as an intrinsic tumor suppressive mechanism. Oncogene-induced senescence is thought to be invariably preceded by hyperproliferation, aberrant ...

    A Pan-cancer analysis reveals high-frequency genetic alterations in mediators of signaling by the tgf-β superfamily 

    Korkut, Anil; Zaidi, Sobia; Kanchi, Rupa S.; Rao, Shuyun; Gough, Nancy R.; Schultz, Andre; Li, Xubin; Lorenzi, Philip L.; Berger, Ashton C.; Robertson, Gordon; Kwong, Lawrence N.; Datto, Mike; Roszik, Jason; Ling, Shiyun; Ravikumar, Visweswaran; Manyam, Ganiraju; Rao, Arvind; Shelley, Simon; Liu, Yuexin; Ju, Zhenlin; Hansel, Donna; Velasco, Guillermo de; Pennathur, Arjun; Andersen, Jesper B.; O'Rourke, Colm J.; Ohshiro, Kazufumi; Jogunoori, Wilma; Nguyen, Bao-Ngoc; Li, Shulin; Osmanbeyoglu, Hatice U.; Ajani, Jaffer A.; Mani, Sendurai A.; Houseman, Andres; Wiznerowicz, Maciej; Chen, Jian; Gu, Shoujun; Ma, Wencai; Zhang, Jiexin; Tong, Pan; Cancer Genome Atlas Research Network (2021-07-14)

    We present an integromic analysis of gene alterations that modulate transforming growth factor β (TGF-β)-Smad-mediated signaling in 9,125 tumor samples across 33 cancer types in The Cancer Genome Atlas (TCGA). Focusing on ...

    A polymorphic DNA probe from chromosome 7 (7q22) 

    Casals, T.; Nunes Martínez, Virginia; Estivill, Xavier, 1955- (2013-05-06)

    Source/Description: p6a-l is a O.9 kb HindIII/BamHl genomic fragment subclone or cosmic cNX.6a in pUC13. cNX.6a was isolated from a non-methylated enriched library from the CMGT cell line Cll (1,2).