Acceleration and Regioselectivity Switching in 1,3-Dipolar Cycloaddition Reactions Confined in A Bis-Calix[4]pyrrole Cage

Author

Li, Yifan

Aragay, Gemma

Ballester, Pablo

Publication date

2025-07-07



Abstract

We report the results of our investigations on the role of the octa-imine bis-calix[4]pyrrole cage 1 in mediating confined 1,3-dipolar cycloaddition reactions of a series of 4-azido(alkyl)-pyridine-N-oxides (alkyl = null, Me, Et; 2a-c) with 1-(2-propynyl)-4(1H)-pyridinone (4). We performed 1H NMR binding studies of the different substrates with the octa-imine cage, evidencing the formation of thermodynamically and kinetically highly stable inclusion homo-complexes featuring 1:1 and 2:1 stoichiometry. We used simulated speciation profiles and performed ITC experiments to thermodynamically characterize the formed complexes. Adding mixtures of an azido-derivative with the propynyl-pyridinone in a solution of cage 1 resulted in the formation of the expected 1:1 and 2:1 homo-complexes, and allowed the detection and characterization of the corresponding ternary hetero-complexes (Michaelis) in solution, 2•4⊂1. The azide-alkyne cycloaddition reactions are significantly accelerated by confinement of the reactants in cage 1. We assessed the reactions’ acceleration factor by determining their effective molarities (EM = kintra/kbulk). We derived the kintra values from the best-fit computer simulation of an elaborated theoretical kinetic model to the experimental kinetic data. The determined EM values range from 2000 to 70 M depending on the length of the azido(alkyl) spacer. Notably, we observed a complete switching in the regioselectivity of the confined cycloaddition reactions. That is, the confined reaction is stereoselective for the 1,4-isomer of the triazole adduct of the 4-azido pyridine-N-oxide derivative 2a, but turns stereoselective for the 1,5-counterpart for the azido(methyl) and azido(ethyl) derivatives, 2b and 2c. We used the computed DFT structures of the inclusion complexes to rationalize our findings.

Document Type

Article

Document version

Accepted version

Language

English

CDU Subject

54 - Chemistry. Crystallography. Mineralogy

Subject

Química

Pages

12 p.

Publisher

RSC

Grant Agreement Number

MICIU/AEI/10.13039 /501100011033/FEDER, UE (PID2023-149233NB-I00)

Severo Ochoa Excellence Accreditations CEX2019-000925-S and CEX2024-001469-S funded by MCIU/AEI/10.13039/501100011033

CERCA Program/Generalitat de Catalunya

AGAUR (2021-SGR-00851)

ICIQ Foundation

Documents

d5sc03033a.pdf

1.530Mb

 

Rights

Attribution-NonCommercial 4.0 International

Attribution-NonCommercial 4.0 International

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Papers [1240]