An end-to-end framework for intima media measurement and atherosclerotic plaque detection in the carotid artery

dc.contributor.author
Gago, Lucas
dc.contributor.author
Vila Muñoz, Maria del Mar
dc.contributor.author
Grau, Maria
dc.contributor.author
Remeseiro López, Beatriz
dc.contributor.author
Igual Muñoz, Laura
dc.date.issued
2023-03-23T17:38:50Z
dc.date.issued
2023-03-23T17:38:50Z
dc.date.issued
2022-08
dc.date.issued
2023-03-23T17:38:51Z
dc.identifier
0169-2607
dc.identifier
https://hdl.handle.net/2445/195871
dc.identifier
724743
dc.identifier
35777216
dc.description.abstract
Background and objectives: The detection and delineation of atherosclerotic plaque are usually manually performed by medical experts on the carotid artery. Evidence suggests that this manual process is subject to errors and has a large variability between experts, equipment, and datasets. This paper proposes a robust end-to-end framework for automatic atherosclerotic plaque detection. Methods: The proposed framework is composed of: (1) a semantic segmentation model based on U-Net, with EfficientNet as the backbone, that obtains a segmentation mask with the carotid intima-media region; and (2) a convolutional neural network designed using Bayesian optimization that simultaneously performs a regression to get the average and maximum carotid intima media thickness, and a classification to determine the presence of plaque. Results: Our approach improves the state-of-the-art in both co and bulb territories in the REGICOR database, with more than 8000 images, while providing predictions in real-time. The correlation coefficient was 0.89 in the common carotid artery and 0.74 for bulb region, and the F1 score for atherosclerotic plaque detecting was 0.60 and 0.59, respectively. The experimentation carried out includes a comparison with other fully automatic methods for carotid intima media thickness estimation found in the literature. Additionally, we present an extensive experimental study to evaluate the robustness of our proposal, as well as its suitability and efficiency compared to different versions of the framework. Conclusions: The proposed end-to-end framework significantly improves the automatic characterization of atherosclerotic plaque. The generation of the segmented mask can be helpful for practitioners since it allows them to evaluate and interpret the model's results by visual inspection. Furthermore, the proposed framework overcomes the limitations of previous research based on ad-hoc post-processing, which could lead to overestimations in the case of oblique forms of the carotid artery.
dc.format
12 p.
dc.format
application/pdf
dc.language
eng
dc.publisher
Elsevier
dc.relation
Reproducció del document publicat a: https://doi.org/10.1016/j.cmpb.2022.106954
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Computer Methods and Programs in Biomedicine, 2022, vol. 223, p. 106954
dc.relation
https://doi.org/10.1016/j.cmpb.2022.106954
dc.rights
cc-by-nc-nd (c) Gago et al., 2022
dc.rights
https://creativecommons.org/licenses/by-nc-nd/4.0/
dc.rights
info:eu-repo/semantics/openAccess
dc.source
Articles publicats en revistes (Matemàtiques i Informàtica)
dc.subject
Artèries caròtides
dc.subject
Aterosclerosi
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Colesterol
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Aprenentatge
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Carotid artery
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Atherosclerosis
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Cholesterol
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Learning
dc.title
An end-to-end framework for intima media measurement and atherosclerotic plaque detection in the carotid artery
dc.type
info:eu-repo/semantics/article
dc.type
info:eu-repo/semantics/publishedVersion


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