Genome-wide association study identifies multiple risk loci for chronic lymphocytic leukemia

Author

Berndt, Sonja I.

Skibola, Christine F.

Joseph, Vijai

Camp, Nicola J.

Nieters, Alexandra

Wang, Zhaoming

Cozen, Wendy

Monnereau, Alain

Wang, Sophia S.

Kelly, Rachel S.

Lan, Qing

Teras, Lauren R.

Chatterjee, Nilanjan

Chung, Charles C.

Yeager, Meredith

Brooks-Wilson, Angela R.

Hartge, Patricia

Purdue, Mark P.

Birmann, Brenda M.

Armstrong, Bruce K.

Cocco, Pierluigi

Zhang, Yawei

Severi, Gianluca

Zeleniuch-Jacquotte, Anne

Lawrence, Charles

Burdette, Laurie

Yuenger, Jeffrey

Hutchinson, Amy

Jacobs, Kevin B.

Call, Timothy G.

Shanafelt, Tait D.

Novak, Anne J.

Kay, Neil E.

Liebow, Mark

Wang, Alice H.

Smedby, Karin E.

Adami, Hans-Olov

Melbye, Mads

Glimelius, Bengt

Chang, Ellen T.

Glenn, Martha

Curtin, Karen

Cannon-Albright, Lisa A.

Jones, Brandt

Diver, W. Ryan

Link, Brian K.

Weiner, George J.

Conde, Lucía

Bracci, Paige M.

Riby, Jacques

Holly, Elizabeth A.

Smith, Martyn T.

Jackson, Rebecca D. J.

Tinker, Lesley F.

Benavente, Yolanda

Becker, Nikolaus

Boffetta, Paolo

Brennan, Paul

Foretova, Lenka

Maynadié, Marc

McKay, James D.

Staines, Anthony

Publication date

2018-11-12T15:44:17Z

2018-11-12T15:44:17Z

2013-01-01

2018-11-12T15:44:17Z

Abstract

Genome-wide association studies (GWAS) have previously identified 13 loci associated with risk of chronic lymphocytic leukemia or small lymphocytic lymphoma (CLL). To identify additional CLL susceptibility loci, we conducted the largest meta-analysis for CLL thus far, including four GWAS with a total of 3,100 individuals with CLL (cases) and 7,667 controls. In the meta-analysis, we identified ten independent associated SNPs in nine new loci at 10q23.31 (ACTA2 or FAS (ACTA2/FAS), P = 1.22 x 10(-14)), 18q21.33 (BCL2, P = 7.76 x 10(-11)), 11p15.5 (C11orf21, P = 2.15 x 10(-10)), 4q25 (LEF1, P = 4.24 x 10(-10)), 2q33.1 (CASP10 or CASP8 (CASP10/CASP8), P = 2.50 x 10(-9)), 9p21.3 (CDKN2B-AS1, P = 1.27 x 10(-8)), 18q21.32 (PMAIP1, P = 2.51 x 10(-8)), 15q15.1 (BMF, P = 2.71 x 10(-10)) and 2p22.2 (QPCT, P = 1.68 x 10(-8)), as well as an independent signal at an established locus (2q13, ACOXL, P = 2.08 x 10(-18)). We also found evidence for two additional promising loci below genome-wide significance at 8q22.3 (ODF1, P = 5.40 x 10(-8)) and 5p15.33 (TERT, P = 1.92 x 10(-7)). Although further studies are required, the proximity of several of these loci to genes involved in apoptosis suggests a plausible underlying biological mechanism.

Document Type

Article
Accepted version

Language

English

Subjects and keywords

Leucèmia limfocítica crònica; Genòmica; Chronic lymphocytic leukemia; Genomics

Publisher

Nature Publishing Group

Related items

Versió postprint del document publicat a: https://doi.org/10.1038/ng.2652

Nature Genetics, 2013, vol. 8, num. 45, p. 868-876

https://doi.org/10.1038/ng.2652

Rights

(c) Springer Nature, 2013